DNA methylation (array)
29 datasets in this modality.
- Predicting brain tumor recurrence: development and validation of a DNA-methylation based nomogram in meningioma
Nassiri et al., 2019
EGAS00001003490, EGAD00010001687
Samples 280Princess Margaret Cancer Centre, University Health Network, Toronto (International Consortium on Meningiomas, multi-institutional) - Meningioma_DNA_methylation_project
No linked publication
10.6084/m9.figshare.32043249
Samples 231Not reported - Molecular Characterization Initiative (MCI), pediatric meningioma subset
No linked publication
CCDI-MCI
Samples 31WESChildren's Hospital of Philadelphia (CCDI Data Coordinating Center) / National Cancer Institute Childhood Cancer Data Initiative - Multisite methylation profiling of primary human meningioma
Vasudevan et al., 2020
GSE151067
Samples 88University of California San Francisco - Meningioma methylation analysis
Nassiri et al., 2021
GSE168726
Samples 121Princess Margaret Cancer Center - DNA Methylation Signatures Differentiate Meningiomas from Normal Dura [HumanMethylation450]
Wedemeyer et al., 2022
GSE178139
Samples 24University of Southern California - Meningioma methylation analysis.
Nassiri et al., 2021
GSE180061
Samples 121Princess Margaret Cancer Center - Meningioma DNA methylation grouping reveals biologic drivers and therapeutic vulnerabilities (array)
Choudhury et al., 2022
GSE183647
Samples 565University of California, San Francisco - Multiple approaches converge on three biological subtypes of meningioma and extract new insights from published studies [Methylation array]
Bayley et al., 2022
GSE189521
Samples 110Baylor College of Medicine - Epigenome analysis of formalin-fixed paraffin-embedded (FFPE) meningioma samples
Daoud et al., 2022
GSE200321
Samples 64NYU Langone Health Ambulatory Care Center - Genetic and epigenetic profiling identifies two distinct classes of spinal meningiomas
Ricklefs et al., 2022
GSE212449
Samples 65University Medical Center Hamburg-Eppendorf - DNA methylation of human FFPE meningioma samples
Chen et al., 2023
GSE221029
Samples 230UCSF - DNA methylation from human meningioma samples
Lucas et al., 2023
GSE228316
Samples 16UCSF - Epigenetic downregulation of hsa-miR-193b-3p increases Cyclin D1 expression level and cell proliferation in human meningiomas
Kober et al., 2023
GSE241956
Samples 27Maria Sklodowska-Curie National Research Institute of Oncology - Multiomic and clinical analysis of multiply recurrent meningiomas reveals risk factors, underlying biology, and insights into evolution
Pugazenthi et al., 2024
GSE267654
Samples 43Washington University School of Medicine - Meningioma methylation data
Wang et al., 2024
GSE270371
Samples 994Princess Margaret Cancer Center - Molecular signatures define BAP1-altered meningioma as a distinct CNS tumor with deregulation of Polycomb repressive complex target genes
Sievers et al., 2025
GSE284758
Samples 42University Hospital Heidelberg, Intitute of Pathology - Development, validation, and clinical utility of a novel methylation classifier for recurrence risk prediction in meningiomas [dataset 1]
Duckett et al., 2025
GSE292325
Samples 186Northwestern Medicine - Development, validation, and clinical utility of a novel methylation classifier for recurrence risk prediction in meningiomas [dataset 2]
Duckett et al., 2025
GSE292326
Samples 37Northwestern Medicine - DNA methylation profiling of incidental meningiomas
Nguyen et al., 2026
GSE293851
Samples 131University of California, San Francisco - DNA methylation profiling identifies long-range epigenetic silencing of clustered protocadherins as a key determinant of meningioma progression [discovery]
No linked publication
GSE304094
Samples 231Hertie-Institute for Clinical Brain Research - DNA methylation profiling identifies long-range epigenetic silencing of clustered protocadherins as a key determinant of meningioma progression [longitudinal]
No linked publication
GSE304096
Samples 42Hertie-Institute for Clinical Brain Research - Pediatric and AYA meningiomas constitute a molecularly distinct entity not captured by adult-based risk strategies
No linked publication
GSE317578
Samples 293University Hospital Heidelberg, Intitute of Pathology - Genomic hallmarks of depot medroxyprogesterone acetate-associated meningiomas [methylation]
Huq et al., 2026
GSE335176
Samples 10University of Pittsburgh Medical Center - DNA methylation in the malignant transformation of meningiomas
Gao et al., 2013
GSE42882
Samples 19USC - NF2 disruption by genomic rearrangments drives a subset of radiation induced meningiomas
Agnihotri et al., 2017
GSE83933
Samples 39University of Pittsburgh - Integrated genomic analyses of de novo pathways underlying atypical meningiomas [methylation]
Harmancı et al., 2017
GSE91375
Samples 60Yale University - MeLB Raw DNA Methylation Data
Herrgott et al., 2023
zrc982rvjm
Samples 181Cell-free DNA epigenomic profilingHenry Ford Health / Michigan State University - MP2PRT-MNG: Identifying Novel Molecular Markers of Response to Radiotherapy in Meningiomas Using Samples from the RTOG-0539
No linked publication
phs003707.v2.p1
Samples 350Bulk RNA-seqWESCenter for Cancer Research, National Cancer Institute, National Institutes of Health