Bulk RNA-seq
37 datasets in this modality.
- Comprehensive RNA-Seq Dataset for Pan-Cancer Tumor Classification [pediatric meningioma subset]
Wallis et al., 2025
E-MTAB-14038
Samples 7Princess Máxima Center for Pediatric Oncology, Utrecht - RNA-sequencing of meningiomas for integrative molecular classification
Nassiri et al., 2021
EGAS00001004982, EGAD00001007494
Samples 124Princess Margaret Cancer Center - Transcriptome_analysis_of_anaplastic_meningiomas
Collord et al., 2018
EGAS00001001873, EGAD00001003255
Samples 31Wellcome Sanger Institute / Cambridge University Hospitals NHS Foundation Trust - RNA seq on 19 samples of Radiation-Induced Meningiomas
Agnihotri et al., 2017
EGAS00001002318, EGAD00001004358
Samples 19University Health Network / Princess Margaret Cancer Centre - RNA-seq from human meningioma samples
Vasudevan et al., 2018
GSE101638
Samples 42University of California San Francisco - Molecular profiling predicts meningioma recurrence and reveals loss of DREAM complex repression in aggressive tumors
Patel et al., 2019
GSE136661
Samples 160Baylor College of Medicine - Enhancer landscape of meningioma [RNA-seq]
Prager et al., 2020
GSE139651
Samples 13Cleveland Clinic - Multisite methylation profiling of primary human meningioma [RNA-seq]
Magill et al., 2020
GSE151921
Samples 77University of California San Francisco - Genomic profiling of anaplastic meningioma identifies recurrent genetic alterations with relevance to lower-grade meningioma
Cimino et al., 2019
GSE173825
Samples 8National Institutes of Health - Cancer-specific deficiency of SMARCE1, a module-linking subunit, generates a targetable chromatin regulatory dependency in clear cell meningioma
St Pierre et al., 2022
GSE174360
Samples 15Broad Institute of MIT and Harvard, Harvard Medical School, Dana-Farber Cancer Institute - RNA sequencing of meningiomas
Choudhury et al., 2022
GSE183653
Samples 185University of California, San Francisco - Multiple approaches converge on three biological subtypes of meningioma and extract new insights from published studies [RNA-Seq]
Bayley et al., 2022
GSE189672
Samples 110Baylor College of Medicine - Pre-clinical validation of an RNA-based precision oncology platform for patient-therapy alignment in a diverse set of human malignancies resistant to standard treatments
No linked publication
GSE197763
Samples 102Columbia University Irving Medical Center - Columbia University Irving Medical Center RNASeq of meningioma tumors
Mundi et al., 2023
GSE212377
Samples 102COLUMBIA UNIVERSITY HEALTH SCIENCES - Hypermitotic meningiomas harbor DNA methylation subgroups with distinct biological and clinical features
Choudhury et al., 2023
GSE212666
Samples 302UCSF - An RNA-based precision oncology platform for patient-therapy alignment in a diverse set of treatment resistant malignancies [meningioma sample]
Mundi et al., 2023
GSE212854
Samples 1Columbia University - Specific gene expression signatures of low grade meningiomas
Tsitsikov et al., 2023
GSE221429
Samples 20OUHSC - "Immunogenic subtype" characterised by macrophages infiltration predominantly comprise meningiomas in neurofibromatosis type 2 patients
Teranishi et al., 2023
GSE232528
Samples 29The University of Tokyo - Meningioma transcriptomic landscape demonstrates novel subtypes with regional associated biology and patient outcome
Thirimanne et al., 2024
GSE252291
Samples 279Fred Hutch Cancer Center - Single-cell atlas of the human brain vasculature across development, adulthood and disease [meningioma subset, bulk RNA-seq]
Wälchli et al., 2024
GSE256492
Samples 6University College London (contact institution per GEO; multi-site collaboration per publication) - Leveraging Single-Cell Sequencing to Classify and Characterize Tumor Subgroups in Bulk RNA-Sequencing Data
Shetty et al., 2024
GSE264680
Samples 167Baylor College of Medicine - Retrospective meningiomas RNA-sequencing data.
Wang et al., 2024
GSE270638
Samples 384Princess Margaret Cancer Center - GSTM1 null genotype underpins recurrence of NF2 meningiomas
Johnson et al., 2024
GSE283616
Samples 16University of Oklahoma Health Sciences - Integrative transcriptomics and network analysis reveals core genes driving meningioma pathogenesis and clinical outcomes
Zohdy et al., 2025
GSE285889
Samples 14Emory University - Patient-Derived Meningioma Organoids: A Reliable Model for Studying Human Tumor Pathophysiology [parental tumor tissue]
Zohdy et al., 2025
GSE287174
Samples 33Emory University - Molecular signatures define BAP1-altered meningioma as a distinct CNS tumor with deregulation of Polycomb repressive complex target genes
Sievers et al., 2025
GSE287322
Samples 29FHCRC - Meningioma microenvironment harbors a rich immune landscape with therapeutic implications (Bulk RNA-seq part)
Guo et al., 2026
GSE290805
Samples 47Mass General Brigham - STING activation induces cytotoxic and immune responses in meningiomas via inflammatory cell death pathways
Youngblood et al., 2026
GSE297637
Samples 8Northwestern University - NICO Myriad system Improves sample quality for molecular pathology assays
No linked publication
GSE298049
Samples 29Florida International University - Long-read RNA Sequencing of Human Meningiomas
No linked publication
GSE300855
Samples 84UCSF - DNA methylation profiling identifies long-range epigenetic silencing of clustered protocadherins as a key determinant of meningioma progression [RNA-seq]
No linked publication
GSE304087
Samples 10Hertie-Institute for Clinical Brain Research - Transcriptomic profiling of meningiomas reveals SMARCB1 mutation-driven immunosuppression via IL-17/CSF1 axis
Jin et al., 2026
GSE304666
Samples 14The Affiliated Shanghai Fourth People's Hospital of Tongji University - Genomic hallmarks of depot medroxyprogesterone acetate-associated meningiomas [RNA-seq]
Huq et al., 2026
GSE335175
Samples 10University of Pittsburgh Medical Center - Recurrent somatic mutations in POLR2A define a distinct subset of meningiomas [RNA-seq]
Clark et al., 2016
GSE85133
Samples 19Yale University School of Medicine - Meningioma (University of Toronto, Nature 2021)
Nassiri et al., 2021
mng_utoronto_2021
Samples 121WESCNV / SNP arrayProteomics (bulk MS)University of Toronto / Princess Margaret Cancer Centre - MP2PRT-MNG: Identifying Novel Molecular Markers of Response to Radiotherapy in Meningiomas Using Samples from the RTOG-0539
No linked publication
phs003707.v2.p1
Samples 350DNA methylation (array)WESCenter for Cancer Research, National Cancer Institute, National Institutes of Health - Brain tumors cfRNA sequencing data, meningioma subset
Huang et al., 2025
PRJCA024570
Samples 89Shenzhen University