Low-coverage Single-cell Whole Genome Sequencing Data from Paired Meningioma Samples
EGAS50000000860, EGAD50000001254Zhao et al., 2025
Overview
- Modality
- Single-cell / single-nucleus DNA sequencing
- Sample count
- 2
- Patient count
- 1
- Institution
- University of Massachusetts Chan Medical School, Dept. of Neurological Surgery (tissue source) / Harvard Medical School, Dept. of Biomedical Informatics (computational)
- Corresponding author
- Mark D Johnson, Peter J Park
- Platform
- NextSeq 1000
- Access type
- controlled
- Tissue preservation
- Not reported
- WHO edition
- Not reported
Cohort detail
- Grade breakdown
- G1: not reported G2: 1 G3: 1
- Sex distribution
- Not reported
- Age distribution
- Not reported
- Anatomic location
- Not reported
- Brain invasion
- Not reported
- Normal/control tissue
- None
Priority attributes
WHO grade breakdown availableSingle-cell resolutionPrimary vs. recurrent annotatedPeer-reviewed
Publications
- Zhao Y, et al. High-resolution detection of copy number alterations in single cells with HiScanner. Nature Communications, 2025. PMID 40595464 · DOI
Sources
- EGA study pagehttps://ega-archive.org/studies/EGAS50000000860
- EGA dataset pagehttps://ega-archive.org/datasets/EGAD50000001254